Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10630406 - 10631081

Intron Length:

676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGCCTT

5'SS Class:

major

3'SS Sequence:

TACATTATCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TAATCCTTTACA

Flanking Amino Acid:

KIQALLLTVLATLVKYTTDE

Intron Amino Acid Position:

2582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

67.4

43.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

67.6

0.4

0.9

61.9

38.3

Minor 5ss

46.4

-0.4

3.2

71.6

39.4

Minor BPS

72.1

0.69

1.6

77.73

38.7

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10630406_10631081_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: