Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10635391 - 10635971

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTGGGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

TTGTATGCAATA

Flanking Amino Acid:

LDSLRVFNDKSPEEVFMEIR

Intron Amino Acid Position:

2314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

39.5

Major BPS

62.7

0.32

1.4

63.4

Major PPT

0.34

1.2

65.4

45.5

Minor 5ss

35.7

-1.6

3.3

45.9

49.3

Minor BPS

44.2

-0.4

2.2

59.97

40.7

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10635391_10635971_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: