Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10639480 - 10640255

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTATTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATTTATTCAACA

Flanking Amino Acid:

LCTCSQLHFSEETKQVLRLS

Intron Amino Acid Position:

2102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

81.8

32.5

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

75.5

0.58

70.8

Minor 5ss

43.3

-0.7

2.8

60.6

43.7

Minor BPS

62.3

0.38

1.7

75.28

35.7

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10639480_10640255_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: