Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10643178 - 10643926

Intron Length:

749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTACTGATC

5'SS Class:

major

3'SS Sequence:

TGCTTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

ACTATTACAAGT

Flanking Amino Acid:

LNLGSSDPSLRSAAYNLLCA

Intron Amino Acid Position:

1829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.31

1.2

61.2

43.4

Major BPS

64.7

0.37

31.5

Major PPT

81.3

0.7

0.9

75.5

38.4

Minor 5ss

36.3

-1.6

3.5

52.1

44.9

Minor BPS

40.9

-0.6

1.9

55.47

40.8

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10643178_10643926_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: