Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10644268 - 10644486

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

AGGTGCTGAACC

Flanking Amino Acid:

AHKDTKVSIKVGSTAVQVTS

Intron Amino Acid Position:

1716

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

84.6

33.2

Major BPS

77.3

0.68

79.3

29.4

Major PPT

77.5

0.62

82.1

Minor 5ss

41.9

-0.9

3.1

59.6

38.8

Minor BPS

52.1

0.04

1.9

62.63

42.4

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10644268_10644486_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: