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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10648899_10649012_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10648899 - 10649012

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

TATCTCAAAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

CCTATCTCAAAA

Flanking Amino Acid:

TTWSKEMCEDTQQGKRRPRS

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

70.3

40.5

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

53.6

0.08

1.2

54.9

38.1

Minor 5ss

-1

59.3

Minor BPS

48.7

-0.1

1.7

57.06

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024638

10648510 - 10649939

1430