Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10666582 - 10666902

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAGA

5'SS Class:

major

3'SS Sequence:

TACTGCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

ATGTCATGTACT

Flanking Amino Acid:

TSSKFEEFMTRHQVHEKEEF

Intron Amino Acid Position:

1534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.5

39.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

76.2

0.59

0.8

73.6

36.7

Minor 5ss

31.7

-2.1

3.1

40.5

45.2

Minor BPS

49.1

0.01

2.1

72.69

43.7

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10666582_10666902_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: