Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10667050 - 10667511

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTGTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TATCTGTTAAGT

Flanking Amino Acid:

EKIGQYLSSNRDHKAVGRRP

Intron Amino Acid Position:

1485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

0.75

78.6

Major PPT

0.47

62.2

43.8

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

49.6

0.05

2.3

74.02

42.7

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10667050_10667511_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: