Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10667904 - 10668657

Intron Length:

754

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATCAG

5'SS Class:

major

3'SS Sequence:

TTTTATTGTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTATTG

Flanking Amino Acid:

IERGLKLMSKILQSIANHVL

Intron Amino Acid Position:

1404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

0.9

67.3

39.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.5

0.71

0.9

81.4

35.9

Minor 5ss

27.5

-2.6

2.8

31.4

42.8

Minor BPS

52.3

-0

1.6

56.3

40.4

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10667904_10668657_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: