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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10668817_10670477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10668817 - 10670477

Intron Length:

1661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

CTCAACTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TAATTCTCAACT

Flanking Amino Acid:

VKEKKENKKSVVSQRFPQNS

Intron Amino Acid Position:

1351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

72.9

39.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

67.1

0.38

0.9

60.6

34.9

Minor 5ss

-0.4

2.8

63.9

41.4

Minor BPS

69.9

0.7

1.5

82.44

38.3

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285