Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10673011 - 10673887

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGAGAT

5'SS Class:

major

3'SS Sequence:

GGGTCTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TATACATTTATG

Flanking Amino Acid:

QHVSFEVDPTRLEPTESLEE

Intron Amino Acid Position:

1284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.2

68.9

35.6

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

74.1

0.54

69.7

41.5

Minor 5ss

34.5

-1.8

3.3

47.4

48.1

Minor BPS

48.4

-0.2

58.66

42.9

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10673011_10673887_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: