Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10675144 - 10675726

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

GCTTCTTTTAAG

Flanking Amino Acid:

LANVVPCSQWDELARVLVTL

Intron Amino Acid Position:

1196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.2

30.6

Major BPS

74.1

0.6

66.7

39.9

Major PPT

0.56

33.3

Minor 5ss

39.1

-1.2

2.8

40.8

45.4

Minor BPS

50.7

-0.1

1.8

57.03

44.3

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10675144_10675726_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: