Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10675939 - 10676050

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

TTTTCCTTAGTA

Flanking Amino Acid:

NVDSGLMHSIGLGYHKDLQT

Intron Amino Acid Position:

1125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

93.4

0.98

0.7

92.3

26.6

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

79.3

0.92

1.4

87.45

30.8

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10675939_10676050_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: