Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10678644 - 10679077

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAC

U12 Branch Point Sequence:

AGGAAGTTAACA

Flanking Amino Acid:

ISKFFDSQGQVLLTETNTQF

Intron Amino Acid Position:

910

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

72.1

40.4

Major BPS

61.1

0.28

1.1

69.4

35.9

Major PPT

82.1

0.72

0.6

81.8

23.1

Minor 5ss

44.9

-0.5

46.2

Minor BPS

-0.3

2.2

56.54

42.1

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10678644_10679077_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: