Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10679519 - 10680088

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTATG

5'SS Class:

major

3'SS Sequence:

CCTTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTAATTGAAAA

Flanking Amino Acid:

YPKTKMEDGQVTESLHKTIV

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

1.1

77.8

38.7

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

85.1

0.79

0.6

84.1

23.9

Minor 5ss

39.4

-1.2

2.8

50.6

45.9

Minor BPS

50.3

0.01

1.7

67.73

37.8

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10679519_10680088_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: