Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10680366 - 10680683

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TGTTTCATAAAT

Flanking Amino Acid:

FASVSNMMSTGRAALQKRVM

Intron Amino Acid Position:

710

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

77.8

0.63

0.9

72.8

37.5

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

64.2

0.52

1.7

83.06

37.3

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10680366_10680683_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: