Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10680931 - 10681638

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATTATCGAACT

Flanking Amino Acid:

LRRGKGNSSMESTAGCSGTP

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

75.9

0.64

66.1

40.5

Major PPT

0.36

1.1

64.2

41.9

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

50.3

0.09

1.9

76.3

39.5

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10680931_10681638_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: