Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10681783 - 10682277

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

AGGTGATTAATT

Flanking Amino Acid:

CRNKFLLKNKQSDRSSCHFL

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

33.6

Major BPS

76.9

0.67

66.3

40.4

Major PPT

0.79

0.7

26.6

Minor 5ss

40.4

-1.1

2.9

48.9

41.5

Minor BPS

49.8

0.07

68.26

42.7

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10681783_10682277_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: