Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10684378 - 10685200

Intron Length:

823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTTTGCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TGCTTCTTAAAG

Flanking Amino Acid:

IHADPKLLLCNPRKQGPETQ

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

74.7

41.5

Major BPS

82.2

0.8

71.9

35.8

Major PPT

86.7

0.82

0.7

85.4

29.4

Minor 5ss

41.3

-1

2.8

52.3

44.3

Minor BPS

65.2

0.34

1.5

64.96

42.7

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10684378_10685200_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: