Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10690832 - 10691432

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

ACCTTTTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTGTGTTGAACT

Flanking Amino Acid:

LYQTPQTDMADCAEKLFDLV

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.3

40.1

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

77.9

0.63

0.9

73.2

35.6

Minor 5ss

32.6

-2

3.4

44.3

44.6

Minor BPS

60.3

0.4

1.9

80.43

41.7

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10690832_10691432_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: