Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10691509 - 10691755

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTACCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTGTTACCT

Flanking Amino Acid:

QLAVINSLEKAFWNWVENYP

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

100

1.18

0.6

100

Major BPS

87.3

0.93

0.8

36.5

Major PPT

80.7

0.69

0.9

74.8

35.1

Minor 5ss

41.7

-0.9

2.9

59.7

44.8

Minor BPS

60.3

0.4

2.3

86.99

39.2

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10691509_10691755_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: