Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10691824 - 10692038

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACGT

5'SS Class:

strong_major

3'SS Sequence:

TTTACCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTACCTTTACA

Flanking Amino Acid:

DCSKLKRLLQETVFKFKALK

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

68.1

42.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.4

0.82

0.8

80.3

31.6

Minor 5ss

39.8

-1.1

3.1

47.1

Minor BPS

74.5

0.77

1.6

84.7

34.6

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10691824_10692038_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: