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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10734665_10735522_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10734665 - 10735522

Intron Length:
858

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTATGTGTC

5'SS Class:
major

3'SS Sequence:
TTCCCTGTCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTCCAT

U12 Branch Point Sequence:
TTTTCCATAAGC

Flanking Amino Acid:
ILCSVGASKAVVAAILV*

Intron Amino Acid Position:
238

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.4
0.46
1.1
66.4
37.8

Major BPS
77.3
0.68
1.2
86.7
32.3

Major PPT
76.7
0.6
0.8
71.2
33.2

Minor 5ss
45.5
-0.5
3.1
66.2
39.2

Minor BPS
68.7
0.57
1.9
83.65
35.8

Associated Gene:

Gene:
WSB1

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10731151 - 10735696
4546