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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10734665_10736348_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10734665 - 10736348

Intron Length:
1684

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTATGTGTC

5'SS Class:
major

3'SS Sequence:
TTTCTCTTCCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGAAAAT

U12 Branch Point Sequence:
TTTGCTTGCAGT

Flanking Amino Acid:
ILCSVGASKAADVGDPSQL*

Intron Amino Acid Position:
238

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.4
0.46
1.1
66.4
37.8

Major BPS
55.4
0.14
1.3
61.7
41.5

Major PPT
83.2
0.75
0.7
77.2
31.5

Minor 5ss
45.5
-0.5
3.1
66.2
39.2

Minor BPS
46.3
-0.2
2.2
71.98
45.3

Associated Gene:

Gene:
WSB1

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10731151 - 10736441
5291