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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1076008_1114728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1076008 - 1114728

Intron Length:

38721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCAAT

5'SS Class:

major

3'SS Sequence:

CTCTCCATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TCCACCATAATA

Flanking Amino Acid:

LANISVEELDEIREAFRVLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

74.4

37.7

Major BPS

70.1

0.5

70.3

31.9

Major PPT

79.6

0.67

0.8

73.4

29.9

Minor 5ss

36.1

-1.6

49.4

46.6

Minor BPS

56.7

0.21

1.7

64.77

41.9

Associated Gene:

Gene:

CALN1

Ensembl Gene ID:

ENSAPLG00000015773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018456

1062585 - 1185379

122795

ENSAPLT00000016435

1075116 - 1185379

110264

ENSAPLT00000023343

1054039 - 1179422

125384