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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10828728_10829559_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10828728 - 10829559

Intron Length:

832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGATA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AATGTTTTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

83.9

28.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

84.1

0.77

0.7

80.6

24.7

Minor 5ss

30.4

-2.2

3.2

46.4

Minor BPS

52.5

-0

1.6

55.49

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016806

10828537 - 10832051

3515