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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10855739_10856130_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10855739 - 10856130

Intron Length:
392

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATAGCTC

5'SS Class:
major

3'SS Sequence:
TCTTTACTTACAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCTTTAC

U12 Branch Point Sequence:
CTTTCTTTACTT

Flanking Amino Acid:
GDPASVEFTKLCIDLGWKPK

Intron Amino Acid Position:
286

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.9
0.52
1
62.8
41.6

Major BPS
74
0.6
1
65.6
41.1

Major PPT
86.7
0.83
0.7
80.8
30.2

Minor 5ss
40.8
-1
3.4
58.6
46.2

Minor BPS
68.9
0.67
1.6
82.98
39.3

Associated Gene:

Gene:
NOS2

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10842806 - 10863505
20700

10842287 - 10867331
25045