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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10856273_10856672_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10856273 - 10856672

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TGTTATGTAATG

Flanking Amino Acid:

VQYATNNGNIRSAITIFPQR

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.8

42.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

0.65

0.9

76.3

32.2

Minor 5ss

48.5

-0.1

2.8

67.7

43.5

Minor BPS

48.4

-0.2

2.2

60.65

41.8

Associated Gene:

Gene:

NOS2

Ensembl Gene ID:

ENSAPLG00000016213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038573

10842806 - 10863505

20700

ENSAPLT00000016969

10842287 - 10867331

25045