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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10943603_10950819_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

10943603 - 10950819

Intron Length:

7217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATCCTAA

5'SS Class:

weak_minor

3'SS Sequence:

TAATAAATTGAAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTTGCCTTAACT

Flanking Amino Acid:

QPPHIDYFEEIYVVTELMQS

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.3

56.7

38.8

Major BPS

70.8

0.52

70.6

31.6

Major PPT

56.8

0.15

1.2

54.9

43.2

Minor 5ss

75.2

0.85

1.8

76.4

39.7

Minor BPS

89.4

1.31

1.1

100

28.8

Associated Gene:

Gene:

NLK

Ensembl Gene ID:

ENSAPLG00000002902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002958

10938254 - 10963288

25035

ENSAPLT00000046779

10941764 - 10964288

22525