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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10950927_10951946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10950927 - 10951946

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTAATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTCGTTTAATA

Flanking Amino Acid:

VKVFLYQILRGLKYLHSAGI

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

81.7

0.71

0.9

78.4

39.4

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

64.6

0.46

1.7

76.34

35.2

Associated Gene:

Gene:

NLK

Ensembl Gene ID:

ENSAPLG00000002902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046779

10941764 - 10964288

22525

ENSAPLT00000002958

10938254 - 10963288

25035