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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10953180_10956040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10953180 - 10956040

Intron Length:

2861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAATTA

5'SS Class:

major

3'SS Sequence:

TCTGTACCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TGTTCTGTACCT

Flanking Amino Acid:

LFQAQSPIQQLDLITDLLGT

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

72.8

32.3

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

77.4

0.62

0.9

70.5

35.2

Minor 5ss

-0.3

2.9

64.6

46.8

Minor BPS

54.2

0.21

2.3

80.14

42.2

Associated Gene:

Gene:

NLK

Ensembl Gene ID:

ENSAPLG00000002902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046779

10941764 - 10964288

22525

ENSAPLT00000002958

10938254 - 10963288

25035