Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10967492_10967588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10967492 - 10967588

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGAAAT

5'SS Class:

major

3'SS Sequence:

CTTTTTTCTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AGTGTATTAATC

Flanking Amino Acid:

QLCCDFGLVLLTELLEWYAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

73.4

37.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

81.7

0.71

0.9

24.2

Minor 5ss

33.9

-1.8

3.3

45.4

Minor BPS

52.8

0.07

1.7

62.16

37.3

Associated Gene:

Gene:

TMEM97

Ensembl Gene ID:

ENSAPLG00000023160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017791

10967179 - 10969495

2317