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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11011379_11011926_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11011379 - 11011926

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAGGTATT

5'SS Class:

major

3'SS Sequence:

GTGTGCGTGCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

TCTGCCTTGACT

Flanking Amino Acid:

DSPSKRPALGIRKRHSSGST

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

75.5

40.6

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

54.8

0.11

1.1

46.9

45.9

Minor 5ss

41.5

-0.9

3.2

42.5

Minor BPS

77.3

0.94

1.3

87.04

39.2

Associated Gene:

Gene:

SGSM2

Ensembl Gene ID:

ENSAPLG00000003532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043279

10991385 - 11030033

38649

ENSAPLT00000027528

10991385 - 11111242

119858

ENSAPLT00000003639

10991373 - 11030033

38661