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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11014228_11015977_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11014228 - 11015977

Intron Length:

1750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGCATA

5'SS Class:

major

3'SS Sequence:

TCCTCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

ACAGTGTGGACT

Flanking Amino Acid:

QIVCIHCHQQPESRWTLVLV

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.3

38.6

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

85.1

0.79

0.7

79.9

25.4

Minor 5ss

44.3

-0.6

2.8

56.9

Minor BPS

40.9

-0.6

2.1

53.65

Associated Gene:

Gene:

SGSM2

Ensembl Gene ID:

ENSAPLG00000003532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027528

10991385 - 11111242

119858

ENSAPLT00000043279

10991385 - 11030033

38649