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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11016831_11018307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11016831 - 11018307

Intron Length:

1477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TTTCTTTGAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTCTTTGAGC

Flanking Amino Acid:

IIYPGHKHDNITINYHHLAA

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

68.5

38.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

79.2

0.66

77.6

35.3

Minor 5ss

36.1

-1.6

3.2

50.7

39.7

Minor BPS

71.5

0.66

1.6

81.35

33.5

Associated Gene:

Gene:

SGSM2

Ensembl Gene ID:

ENSAPLG00000003532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043279

10991385 - 11030033

38649

ENSAPLT00000027528

10991385 - 11111242

119858