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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11018443_11021874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11018443 - 11021874

Intron Length:

3432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTTATC

5'SS Class:

major

3'SS Sequence:

TTGTTTTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TGTTTTTTGTTT

Flanking Amino Acid:

RNLTAPNRMKDTSEVIEMQG

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.2

71.9

37.5

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

79.6

0.67

0.8

73.8

36.8

Minor 5ss

42.8

-0.8

2.4

55.3

41.9

Minor BPS

44.5

-0.3

3.4

74.33

37.3

Associated Gene:

Gene:

SGSM2

Ensembl Gene ID:

ENSAPLG00000003532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043279

10991385 - 11030033

38649

ENSAPLT00000027528

10991385 - 11111242

119858