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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11022026_11022588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11022026 - 11022588

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGATAAT

U12 Branch Point Sequence:

TTCCCGATAATG

Flanking Amino Acid:

IPSCCNCIHDRTPLKMLCES

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

60.3

0.26

1.3

61.7

41.5

Major PPT

75.5

0.57

0.9

37.2

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

46.1

-0.4

2.3

57.51

44.3

Associated Gene:

Gene:

SGSM2

Ensembl Gene ID:

ENSAPLG00000003532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043279

10991385 - 11030033

38649

ENSAPLT00000027528

10991385 - 11111242

119858

ENSAPLT00000003639

10991373 - 11030033

38661