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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11025969_11026796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11025969 - 11026796

Intron Length:

828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAGGTCAC

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TCTAGCTTAAGC

Flanking Amino Acid:

VASVCAASYTIELLDTVALN

Intron Amino Acid Position:

768

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.1

57.3

42.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

88.2

0.86

0.6

81.7

30.3

Minor 5ss

35.3

-1.7

3.2

49.2

41.2

Minor BPS

52.7

0.06

2.1

66.73

45.1

Associated Gene:

Gene:

SGSM2

Ensembl Gene ID:

ENSAPLG00000003532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043279

10991385 - 11030033

38649

ENSAPLT00000027528

10991385 - 11111242

119858

ENSAPLT00000003639

10991373 - 11030033

38661