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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11026922_11027346_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11026922 - 11027346

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACAG

5'SS Class:

major

3'SS Sequence:

CTTCTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATCCTATTATCA

Flanking Amino Acid:

NLEKLRNVMCSYVWEHLEVG

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

64.4

41.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

88.7

0.87

0.6

84.3

23.6

Minor 5ss

31.4

-2.1

38.9

46.2

Minor BPS

47.9

-0.1

1.8

39.7

Associated Gene:

Gene:

SGSM2

Ensembl Gene ID:

ENSAPLG00000003532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043279

10991385 - 11030033

38649

ENSAPLT00000027528

10991385 - 11111242

119858

ENSAPLT00000003639

10991373 - 11030033

38661