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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11027430_11027915_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11027430 - 11027915

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGAAGC

5'SS Class:

major

3'SS Sequence:

ATTATACCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAA

U12 Branch Point Sequence:

ATGTTCTGCATT

Flanking Amino Acid:

LAPLMVILDNDQLAYSCFSH

Intron Amino Acid Position:

837

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

61.1

43.9

Major BPS

65.2

0.38

0.9

65.5

27.9

Major PPT

75.2

0.57

0.9

67.7

38.4

Minor 5ss

32.9

-1.9

3.2

43.8

Minor BPS

49.5

0.04

1.9

70.44

41.1

Associated Gene:

Gene:

SGSM2

Ensembl Gene ID:

ENSAPLG00000003532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043279

10991385 - 11030033

38649

ENSAPLT00000027528

10991385 - 11111242

119858

ENSAPLT00000003639

10991373 - 11030033

38661