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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11028696_11111210_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

11028696 - 11111210

Intron Length:

82515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAATG

5'SS Class:

strong_major

3'SS Sequence:

AATTCCAAATAAG|A

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

TTCTCCTCAATT

Flanking Amino Acid:

YRWFLLDFKRELLISNHALK

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

77.4

37.4

Major BPS

73.1

0.58

73.8

32.3

Major PPT

49.6

-0

1.2

52.7

Minor 5ss

37.2

-1.5

49.1

46.7

Minor BPS

75.6

0.88

1.5

88.16

37.4

Associated Gene:

Gene:

SGSM2

Ensembl Gene ID:

ENSAPLG00000003532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027528

10991385 - 11111242

119858