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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11029133_11029944_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11029133 - 11029944

Intron Length:

812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

CTGTCACTGACA

Flanking Amino Acid:

DFTDIIKFFNEMAEHHNAQE

Intron Amino Acid Position:

962

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.2

35.6

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

76.1

0.59

0.9

73.6

Minor 5ss

29.7

-2.3

3.5

37.5

41.8

Minor BPS

49.2

-0

64.38

41.9

Associated Gene:

Gene:

SGSM2

Ensembl Gene ID:

ENSAPLG00000003532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003639

10991373 - 11030033

38661

ENSAPLT00000043279

10991385 - 11030033

38649