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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11140939_11142693_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11140939 - 11142693

Intron Length:

1755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCACTTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTTCTGTTCACT

Flanking Amino Acid:

VSASEDATIKVWDYETGDFE

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

71.2

0.48

69.5

41.3

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

50.6

0.1

2.4

80.65

41.4

Associated Gene:

Gene:

PAFAH1B1

Ensembl Gene ID:

ENSAPLG00000024342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042933

11132706 - 11149148

16443