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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11146208_11146846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11146208 - 11146846

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

CTCTGTGCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

ATCTGCTTACTA

Flanking Amino Acid:

ISTGMCLMTLVGHDNWVRGV

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

78.8

30.7

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

64.5

0.33

1.1

67.2

38.3

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

51.4

0.04

64.95

42.3

Associated Gene:

Gene:

PAFAH1B1

Ensembl Gene ID:

ENSAPLG00000024342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042933

11132706 - 11149148

16443