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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11160420_11161828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11160420 - 11161828

Intron Length:

1409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GTCACCTCAACC

Flanking Amino Acid:

HGSKSLKVALSHHLVARVYE

Intron Amino Acid Position:

1157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.6

41.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

87.5

0.84

0.7

85.8

28.6

Minor 5ss

24.7

-2.9

28.6

43.8

Minor BPS

61.9

0.35

1.6

68.57

42.4

Associated Gene:

Gene:

CLUH

Ensembl Gene ID:

ENSAPLG00000004181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020919

11157051 - 11183544

26494

ENSAPLT00000004369

11157297 - 11184272

26976