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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11161951_11162582_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11161951 - 11162582

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TGGATCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAC

U12 Branch Point Sequence:

GCCTACTTGACT

Flanking Amino Acid:

EDHPEMALLDNNIGLVLHGV

Intron Amino Acid Position:

1117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

65.1

0.38

39.5

Major PPT

0.41

1.1

61.8

44.3

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

62.9

0.49

1.6

72.92

43.9

Associated Gene:

Gene:

CLUH

Ensembl Gene ID:

ENSAPLG00000004181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020919

11157051 - 11183544

26494

ENSAPLT00000004369

11157297 - 11184272

26976