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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11162709_11163297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11162709 - 11163297

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

AAAACATTAATG

Flanking Amino Acid:

IEHPNTIQEYMHLALYCFAN

Intron Amino Acid Position:

1075

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.2

80.7

33.8

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

0.72

0.8

77.7

Minor 5ss

37.4

-1.4

2.6

43.1

36.9

Minor BPS

51.7

-0

1.7

54.51

39.9

Associated Gene:

Gene:

CLUH

Ensembl Gene ID:

ENSAPLG00000004181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020919

11157051 - 11183544

26494

ENSAPLT00000004369

11157297 - 11184272

26976