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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11164654_11165449_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11164654 - 11165449

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

GGGAGCTCAAGC

Flanking Amino Acid:

AKNYFDFSLECENADQAAEV

Intron Amino Acid Position:

921

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

85.8

0.8

80.9

31.1

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

40.5

-0.7

2.1

44.92

42.9

Associated Gene:

Gene:

CLUH

Ensembl Gene ID:

ENSAPLG00000004181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020919

11157051 - 11183544

26494

ENSAPLT00000004369

11157297 - 11184272

26976