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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11165695_11166357_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11165695 - 11166357

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACCT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

TATTCCATGACT

Flanking Amino Acid:

AKHIFKTYLQGVELSGLSAA

Intron Amino Acid Position:

840

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

70.8

39.3

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

72.1

0.5

0.9

66.3

35.7

Minor 5ss

40.7

-1

3.1

57.7

46.5

Minor BPS

0.84

1.6

89.72

33.9

Associated Gene:

Gene:

CLUH

Ensembl Gene ID:

ENSAPLG00000004181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020919

11157051 - 11183544

26494

ENSAPLT00000004369

11157297 - 11184272

26976