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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11167164_11168823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11167164 - 11168823

Intron Length:

1660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

ATATATCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATATAT

U12 Branch Point Sequence:

GTTTCTGTAACC

Flanking Amino Acid:

FLLSCQIPGLVKDCLDHTVL

Intron Amino Acid Position:

768

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

59.1

0.23

1.1

56.7

39.1

Major PPT

74.3

0.55

0.9

67.2

39.2

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

65.8

0.48

78.83

36.8

Associated Gene:

Gene:

CLUH

Ensembl Gene ID:

ENSAPLG00000004181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004369

11157297 - 11184272

26976

ENSAPLT00000020919

11157051 - 11183544

26494